PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0674s0141.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 455aa    MW: 48535.2 Da    PI: 8.6561
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0674s0141.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-3070129159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          ++Dg++WrKYGqK+ kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+
  Kaladp0674s0141.1.p  70 MNDGCQWRKYGQKVAKGNPCPRAYYRCTVAsSCPVRKQVQRCADDMSILITTYEGTHNHP 129
                          58***************************99****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-3256131IPR003657WRKY domain
SuperFamilySSF1182901.31E-2763131IPR003657WRKY domain
PROSITE profilePS5081128.65665131IPR003657WRKY domain
SMARTSM007741.6E-3670130IPR003657WRKY domain
PfamPF031066.3E-2771129IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MDHTSSTEPL TNNTSADNSL DEEKKEDVMG ETWPPPKTLK RSGEDEIDSH HNNGKRARVS  60
VRARCDTPTM NDGCQWRKYG QKVAKGNPCP RAYYRCTVAS SCPVRKQVQR CADDMSILIT  120
TYEGTHNHPL PAAATAMAST TSAAASMLIS GSSSTSSRPV GLGQSSTSTP ATTTSVGLHG  180
LTYNLANGMT SSQPRPHQFY IHNNSQISPS PNTHPTITLD LTASNPFTSP FANPHFNRFT  240
SSSSYDPSRL FPLKSTSLNF ASMDSNPTPT SMSWATNHGS VLSYGNQYPQ SNNRNNHNLG  300
SLTLASRQPH ESIYQSFMQK TSAALHHQQQ QQHLLPDTIA AATKAITADP SFQTALAAAL  360
TSIIGGGASG GGNNNEKVQV SSMENLGQKM KWGDQVSTQR GSGCASSFLN TSSASNAQSS  420
GMMFLQPSSA ATAASKSKST SPSENNNHQD HNTN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-1954132178Probable WRKY transcription factor 4
2ayd_A6e-1957131174WRKY transcription factor 1
2lex_A7e-1954132178Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242382.11e-113PREDICTED: probable WRKY transcription factor 72
SwissprotQ8VWV67e-69WRK61_ARATH; Probable WRKY transcription factor 61
TrEMBLA0A0B2QDN31e-112A0A0B2QDN3_GLYSO; Putative WRKY transcription factor 72
TrEMBLI1KCP91e-112I1KCP9_SOYBN; Uncharacterized protein
STRINGGLYMA06G20300.11e-112(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.12e-56WRKY DNA-binding protein 61